Job Description P0AFI5 Confidence 99.50% Date Thu Jan 5 11:26:25 GMT 2012 Rank 51 Aligned Residues 217 % Identity 12% Template c3hbrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:oxa-48; PDBTitle: crystal structure of oxa-48 beta-lactamase Resolution 1.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	K	T	A	A	A	T	T	A	S	Q	P	E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		W	Q	E	N	K	S	W	N	A	H	F	T	E	H	K	S	Q	G	V	V	V	L	W	N	E	Q	Q	G	F	T	N	N	L	K	R	A	N	Q	A	F	L	P	A	S	T	F	I	P	N	S	L	I	A	L	D	L	G	V	V	K	D	E	H	Q	V	.	.	.	.	.	.	.	F	K	W	D	G	Q	T	R
Template Known Secondary structure						G	G	G	G	G	G	T	G	G	G	T																S		T	T	G	G	G						G	G	G												T	S	S		S	T	T			.	.	.	.	.	.	.	B				S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.
		104	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																										.	.	.
Query SS confidence									.																																																										.	.	.
Query Sequence		R	V	R	L	N	S	E	.	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	.	.	.	S	V	H	N	V	S	T	A	R	D	L	T
Query Conservation									.																																																										.	.	.
Alig confidence									.						.	.	.	.																			.	.	.	.	.	.																									.	.	.
Template Conservation															.	.	.	.																			.	.	.	.	.	.
Template Sequence		D	I	A	T	W	N	R	D	H	N	L	I	T	.	.	.	.	A	M	K	Y	S	V	V	P	V	Y	Q	E	F	A	R	Q	I	G	.	.	.	.	.	.	E	A	R	M	S	K	M	L	H	A	F	D	Y	G	N	E	D	I	S	G	N	V	D	S	F	W	L	D	G	G	I	R	I	S	A	T	E	Q	I
Template Known Secondary structure		S	S	G	G	G	S	S		B					.	.	.	.				T	T														.	.	.	.	.	.												T		T	T					S		T	T	T					S	S
Template Predicted Secondary structure															.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure											.	.	.	.	.																																																						.	.	.
Query SS confidence											.	.	.	.	.																																																						.	.	.
Query Sequence		K	L	L	I	A	S	K	Q	Y	.	.	.	.	.	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	.	.	.	L	V	M	R	T	V	I	N	N	K
Query Conservation											.	.	.	.	.																																																						.	.	.
Alig confidence											.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	L	R	K	L	Y	H	N	K	L	H	V	S	E	R	S	Q	R	I	V	K	Q	A	M	L	T	E	A	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	I	R	A	K	T	G	Y	S	T	R	I	E	P	K	I	G	W	W	V	G	W	V	E	L	D	D	N
Template Known Secondary structure									T	T		S	S	S												T						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S	S												S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		252	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		P	V	A	L	V	V	M	.	.	.	.	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T	W
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		V	W	F	F	A	M	N	M	D	M	P	T	S	D	G	L	G	L	R	Q	A	I	T	K	E	V	L	K	Q
Template Known Secondary structure												S	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions