Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI5
Confidence100.00%DateThu Jan 5 11:26:25 GMT 2012
Rank33Aligned Residues225
% Identity20%Templatec2wuqA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:beta-lactamase regulatory protein blab; PDBTitle: crystal structure of blab protein from streptomyces cacaoi
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70......... 80.........90......... 100.........110......
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Query Sequence  SAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLD. . . . ARLPLDEKLKVDISQTPEMK. GVYSRVRLNSEISRKDM
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Template Sequence  SFLVRDLYTGEEL. GIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITTPGPTGLSRFRHPARVAVDDL
Template Known Secondary structure  TTT

.STT


GGGGTTSS
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GGGG
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   23......30..... ....40.........50.........60.........70.........80.........90.........100.
 
   117..120.........130.........140.........150.........160. ........170.........180........
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Query Sequence  LLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRF. . . . . . . . VEPTGLSVHNVSTARDLTKLLIASKQY
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Template Sequence  LYLSTSVSDGTASDALFEITPP. . . . . . AQVEQMVREWGFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEALWAP
Template Known Secondary structure  S

S
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SGGG
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GG
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   102.......110.........120... ......130.........140.........150.........160.........170.....
 
   189190.........200.........210.........220 .........230.........240.........250......... 260....
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Query Sequence  PLIGQLSTTREDMATFSNPTYTLPFRNTNHLV. . . YRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMD. AFGKY
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Template Sequence  VLTGPALPPEPAARL. . . . RELMAANLLRHRLAPDFASDAATWSSKTGTLLNLRHEVGVVEHADGQVFAVAVLTESQVPA
Template Known Secondary structure  G






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   206...210.........220 .........230.........240.........250.........260.........270.........280.
 
   265....270.......
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Query Sequence  THFADASRLRTWI
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Template Sequence  DSQPGAEALMAQV
Template Known Secondary structure  S

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   289290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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