Job Description P0AFI5 Confidence 98.51% Date Thu Jan 5 11:26:25 GMT 2012 Rank 76 Aligned Residues 225 % Identity 20% Template c2qz6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: first crystal structure of a psychrophile class c beta-2 lactamase Resolution 2.26 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.													.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence													.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.
Template Conservation													.	.																																																								.	.	.
Template Sequence		D	I	A	G	L	S	V	A	V	I	Q	.	.	N	G	K	A	Q	Y	F	N	Y	G	V	A	N	K	D	S	K	Q	P	I	T	E	N	T	L	F	E	I	G	S	V	S	K	T	F	T	A	T	L	A	G	Y	A	L	A	N	G	K	L	K	L	S	D	P	A	.	.	.	S	Q	Y	L	P	A	L	R	G
Template Known Secondary structure		T		S									.	.	T	T									B	S		T	T	T			B			T	T		B				G	G	G															T	T	S			T	T	S	B	G	.	.	.	G	G	G		G	G	G	T	T
Template Predicted Secondary structure													.	.																																																								.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																													.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	.	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	D	K	F	D	H	I	S	L	L	N	L	G	T	Y	T	A	G	G	L	P	L	Q	F	P	T	G	K	M	I	S	Y	Y	Q	H	W	K	P	A	F	A	P	G	T	Q	R	L	Y	S	N	P	S	I	G	L	F	G	H	L	A	A	Q	S	L	G	Q	P	F	E	K	L	M	E	Q	T	V
Template Known Secondary structure		.	.	.	.	.	S	G	G	G	S	S	B						T	T		S	S				S	S																S	S		T	T	T																			T	T	T	S									T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
			152	.	.	.	.	.	.	.	160	.	.	.																													.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		.	K	S	L	G	M	N	N	T	R	F	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	G	L	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.	.	.	.	P	L	I	G	Q	L	S	T	T
Query Conservation		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.																				.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		L	P	K	L	G	L	K	H	T	F	I	S	V	P	E	T	Q	M	S	L	Y	A	Q	G	Y	D	K	A	G	K	P	V	R	V	S	P	G	A	L	D	A	E	A	Y	.	.	.	G	I	K	T	S	T	S	D	L	I	H	Y	V	E	V	N	M	H	P	A	K	L	E	K	P	L	Q	Q	A	I	A	A	T
Template Known Secondary structure		T	G	G	G	T		S	S			S	S			G	G	G	G	G	G	B				B		T	T	S		B							T	T					T	.	.	.																			G	G	G	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																											.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																																				.
Template Sequence		H	T	G	Y	Y	T	V	D	G	M	T	Q	G	L	G	W	E	M	Y	P	Y	P	I	K	V	D	A	L	V	E	G	N	S	T	Q	M	A	M	E	P	H	K	V	N	W	L	T	P	P	Q	A	A	P	L	D	T	L	V	N	K	T	G	S	T	G	G	.	F	G	A	Y	V	A	Y	V	P	S	K	G	L
Template Known Secondary structure		T	S						T	T					S	S						S	S										T		S					S															S	S										S	S	.									T	T	T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	F	A	D	A	S	R	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	V	I	L	A	N	K	N	Y	P	N	A	E	R	V	K	A	A	H	A	I	L	S
Template Known Secondary structure								S	B
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions