Job Description P0AFI5 Confidence 97.27% Date Thu Jan 5 11:26:25 GMT 2012 Rank 92 Aligned Residues 111 % Identity 19% Template c2olvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:penicillin-binding protein 2; PDBTitle: structural insight into the transglycosylation step of bacterial cell2 wall biosynthesis : donor ligand complex Resolution 2.80 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	.	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		G	A	T	I	L	D	S	K	T	G	G	L	V	A	I	S	G	G	R	D	F	K	D	V	V	N	R	N	Q	A	T	D	P	H	P	T	G	S	S	L	K	P	F	L	A	Y	G	P	A	I	E	N	X	K	W	A	T	N	H	A	I	Q	D	E	S	S	Y	Q	V	D	G	S	T	F	R	N	Y	D	T	K
Template Known Secondary structure								T	T	T		B						S	S	T	T			T	T	T	S			T	T	S	S					G	G	G	G					T												T	T	B						S				S	S	S						S	S		S
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M
Query Conservation
Alig confidence							.	.																							.	.
Template Conservation							.	.																							.	.
Template Sequence		S	H	G	T	V	.	.	S	I	Y	D	A	L	R	Q	S	F	N	I	P	A	L	K	A	W	Q	S	V	K	.	.	Q	N	A	G	N	D	A	P	K	K	F	A	A	K	L	G	L
Template Known Secondary structure							.	.								T	T														.	.			T		T	T								T	T	T
Template Predicted Secondary structure							.	.																							.	.
Template SS confidence
		441	.	.	.	.			.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions