Job Description P0AFI5 Confidence 100.00% Date Thu Jan 5 11:26:25 GMT 2012 Rank 9 Aligned Residues 249 % Identity 25% Template c2bcfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable d-alanyl-d-alanine carboxypeptidase PDBTitle: crystal structure of a evolved putative penicillin-binding2 protein homolog, rv2911, from mycobacterium tuberculosis. Resolution 2.30 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	T	T	A	S	Q	P	E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L
Query Conservation
Alig confidence																																																						.																.
Template Conservation																																																						.																.
Template Sequence		Q	P	A	G	S	V	P	I	P	D	G	P	A	Q	T	W	I	V	A	D	L	D	S	G	Q	V	L	A	G	R	D	Q	N	V	A	H	P	P	A	S	T	I	K	V	L	L	A	L	V	A	L	D	.	E	L	D	L	N	S	T	V	V	A	D	V	A	D	T	.	Q	A	E	C	N	C	V	G	V	K	P
Template Known Secondary structure				T	T								S		S							T	T	T								S	T	T			B			G	G	G												.				T	T							T	G	G	G	.			S	S							T
Template Predicted Secondary structure																																																						.																.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		N	S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	.	.	.	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A
Query Conservation																																																														.	.	.
Alig confidence																																		.																												.	.	.
Template Conservation																																		.
Template Sequence		G	R	S	Y	T	V	R	Q	L	L	D	G	L	L	L	V	S	G	N	D	A	A	N	T	L	A	H	X	L	G	G	Q	.	D	V	T	V	A	K	X	N	A	K	A	A	T	L	G	A	T	S	T	H	A	T	T	P	S	G	L	D	G	P	G	G	S	G	A	S	T	A	H	D	L	V	V	I	F	R	A
Template Known Secondary structure		T															S													T	T			.															T		T	T		B		S	S	S	S	S	S		B	T	T	B	S		B	B
Template Predicted Secondary structure																																		.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		S	K	Q	Y	P	L	I	G	Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	.	.	.	V	M	D	A	F
Query Conservation																																																																										.	.	.
Alig confidence																								.	.	.	.															.																																.	.	.
Template Conservation																								.	.	.	.															.
Template Sequence		A	X	A	N	P	V	F	A	Q	I	I	A	E	P	S	A	X	F	P	S	D	E	.	.	.	.	Q	L	I	V	N	Q	D	E	L	L	Q	R	Y	P	.	G	A	I	G	G	K	T	G	Y	T	N	A	A	R	K	T	F	V	G	A	A	A	R	G	G	R	R	L	V	I	A	X	X	Y	G	L	V	K	E
Template Known Secondary structure					S										S									.	.	.	.								T					S	T	.	T										T	T	T											T	T														T
Template Predicted Secondary structure																								.	.	.	.															.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Y	T	H	F	A	D	A	S	R	L	R	T	W	I	E	T	G	K	V	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	P	T	Y	W	D	Q	A	A	T	L	F	D	W	G	F	A	L	N	P	Q	A
Template Known Secondary structure		T																		S		T	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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