Job Description P0AFI5 Confidence 98.52% Date Thu Jan 5 11:26:25 GMT 2012 Rank 74 Aligned Residues 234 % Identity 19% Template c1zkjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:extended-spectrum beta-lactamase; PDBTitle: structural basis for the extended substrate spectrum of cmy-2 10, a plasmid-encoded class c beta-lactamase Resolution 1.55 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.													.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		R	I	P	G	M	A	V	A	V	L	K	.	.	D	G	K	A	H	Y	F	N	Y	G	V	A	N	R	E	S	G	A	G	V	S	E	Q	T	L	F	E	I	G	S	V	S	K	T	L	T	A	T	L	G	A	Y	A	V	V	K	G	A	M	Q	L	D	D	K	A	S	R	H	A	P	W	L	K	G	S	A	F
Template Known Secondary structure		T		S									.	.	T	T									B	S		T	T	T			B			T	T		B				G	G	G															T	T	S			T	T	S	B	G	G	G	G		G	G	G	T	T	S	G	G
Template Predicted Secondary structure													.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
			89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A
Query Conservation		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																											.	.
Template Sequence		D	S	I	T	M	G	E	L	A	T	Y	S	A	G	G	L	P	L	Q	F	P	E	E	V	D	S	S	E	K	M	R	A	Y	Y	R	Q	W	A	P	V	Y	S	P	G	S	H	R	Q	Y	S	N	P	S	I	G	L	F	G	H	L	A	A	S	S	L	K	Q	P	F	A	P	L	M	.	.	E	Q	T	L	L
Template Known Secondary structure		G	S	S	B						T	T		S	S				S	S			T	T			S														S	S		T	T	T																				T	T	S							.	.			T
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																										.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	.	.	.	.	P	L	I	G	Q	L	S	T	T	R	E	D	M	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		P	G	L	G	M	H	H	T	Y	V	N	V	P	K	Q	A	M	A	S	Y	A	Y	G	Y	S	K	E	D	K	P	I	R	V	N	P	G	M	L	A	D	E	A	Y	G	I	K	T	S	S	A	D	L	L	R	F	V	K	A	N	I	G	G	V	D	D	K	A	L	Q	Q	A	I	S	L	T	H	Q	G	H	Y
Template Known Secondary structure				T	T		S	S		B	S	S			G	G	G	G	G	G	B						T	T										T	T																					T	T	T			S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		203	.	.	.	.	.	.	210	.	.	.	.	.	.																					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	S	N	P	T	Y	T	L	P	F	R	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	N	N	K	P	V	A	L	V	V	M	D	A	F	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																										.
Template Sequence		S	V	G	G	M	T	Q	G	L	G	W	E	S	Y	A	Y	P	V	T	E	Q	T	L	L	A	G	N	S	A	K	V	I	L	E	A	N	P	T	A	A	P	R	E	Q	V	L	F	N	K	T	G	S	T	N	G	F	.	G	A	Y	V	A	F	V	P	A	R	G	I	G	I	V	M	L	A	N	R	N	Y	P
Template Known Secondary structure				T	T					S	S						S	S										T	S						S					B															T	T		.								G	G	G	T								S	B
Template Predicted Secondary structure																																																										.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	T	H	F	A	D	A	S	R	L	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	A	R	I	K	A	A	H	A	I	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions