Job Description P0AFI5 Confidence 100.00% Date Thu Jan 5 11:26:25 GMT 2012 Rank 32 Aligned Residues 223 % Identity 18% Template c1w7fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of the class a beta-lactamase bs32 inhibited with isocitrate Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	D	.	.	A	R	L	P	L	D	E	K	L	K	V	D	I	S	Q	T	P	E	M	K	G	V	Y	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L
Query Conservation																																								.	.
Alig confidence															.																									.	.																								.
Template Conservation															.																																																		.
Template Sequence		G	I	F	A	L	D	T	G	T	N	R	T	V	.	T	Y	R	P	D	E	R	F	A	F	A	S	T	I	K	A	L	T	V	G	V	L	L	Q	Q	K	S	I	E	D	L	N	Q	R	I	T	Y	T	R	D	D	L	V	N	Y	N	P	I	T	.	E	K	H	V	D	T	G	M	T	L	K	E	L	A	D	A
Template Known Secondary structure								T	T	T	T				.			S	T	T						G	G	G													S		T	T	G	G	G							T	T	S			S			T	T	G	.	G	G	G	T	T	T
Template Predicted Secondary structure															.																																																		.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																												.	.	.	.	.	.							.
Query SS confidence																																												.	.	.	.	.	.							.
Query Sequence		A	L	M	S	S	E	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I	K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	.	.	.	.	.	.	V	E	P	T	G	L	.	S	V	H	N	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K	Q	Y	P	L	I	G
Query Conservation																																												.	.	.	.	.	.							.
Alig confidence																					.	.	.	.	.																			.	.	.	.	.	.							.
Template Conservation																					.	.	.	.	.
Template Sequence		S	L	R	Y	S	D	N	T	A	Q	N	L	I	L	K	Q	I	G	G	.	.	.	.	.	P	E	S	L	K	K	E	L	R	K	I	G	D	E	V	T	N	P	E	R	F	E	P	E	L	N	E	V	N	P	G	E	T	Q	D	T	S	T	A	R	A	L	A	T	S	L	Q	A	F	A	L	E	D	K	L	P
Template Known Secondary structure																		T	T		.	.	.	.	.											T	T			S							T	T	G	G	G				T	T			T	T																T	S	S	S	S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																																										.																			.	.	.	.	.
Query SS confidence																																																										.																			.	.	.	.	.
Query Sequence		Q	L	S	T	T	R	E	D	M	A	T	F	S	N	P	T	Y	T	L	P	F	R	N	T	N	H	L	V	Y	R	D	N	W	N	I	Q	L	T	K	T	G	F	T	N	A	A	G	H	C	L	V	M	R	T	V	I	.	N	N	K	P	V	A	L	V	V	M	D	A	F	G	K	Y	T	H	.	.	.	.	.
Query Conservation																																																										.																			.	.	.	.	.
Alig confidence																	.	.	.	.	.																																					.																			.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		S	E	K	R	E	L	L	I	D	W	M	K	R	N	T	.	.	.	.	.	T	G	D	A	L	I	R	A	G	V	P	E	G	W	E	V	A	D	K	T	G	A	G	S	Y	G	T	R	N	D	I	A	I	I	W	P	P	K	G	D	P	V	V	L	A	V	L	S	S	R	D	K	K	D	A	K	Y	D	D	K
Template Known Secondary structure														T		S	.	.	.	.	.	S		T	T	T	G	G	G	G	S		T	T											T	T	T											S	S	S												S	S	T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
				267	.	.	270	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	A	D	A	S	R	L	R	T	W
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		L	I	A	E	A	T	K	V	V	V	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions