Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFI5
Confidence38.26%DateThu Jan 5 11:26:25 GMT 2012
Rank102Aligned Residues53
% Identity19%Templatec1tcmB_
PDB info PDB header:glycosyltransferaseChain: B: PDB Molecule:cyclodextrin glycosyltransferase; PDBTitle: cyclodextrin glycosyltransferase w616a mutant from bacillus2 circulans strain 251
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140......... 150.........160.... .... .170.........180.......
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Query Sequence  HYPGGYKAFIKAMNA. KAKSLGMNNTRFVEP. . . . . . . . . . . . . . . . . . . TGLS. . . . . . . VHNVSTARDLTKLLIASKQ
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Template Sequence  YCGGDWQGIINKINDGYLTGMGV. TAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHA
Template Known Secondary structure  B



SSTTGGGT
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TTT

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   4950.........60.........70. ........80.........90.........100.........110.........120.......
 
   188
Predicted Secondary structure 
Query SS confidence 
Query Sequence  Y
Query Conservation   
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Template Conservation   
Template Sequence  K
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   128
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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