Job Description P0AFI5 Confidence 97.86% Date Thu Jan 5 11:26:25 GMT 2012 Rank 88 Aligned Residues 104 % Identity 26% Template c1mwuA_ PDB info
PDB header: biosynthetic proteinChain: A: PDB Molecule: penicillin-binding protein 2a;
PDBTitle: structure of methicillin acyl-penicillin binding protein 2a2 from methicillin resistant staphylococcus aureus strain3 27r at 2.60 a resolution.
Resolution 2.60 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
42 . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
S A M I V D L N T N K V I Y S N H .
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P D L V R P I A S I S K L M T A M V V L D A R .
L P L D E K L
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
S G T A I H P Q T G E L L A L V S T P S Y D V Y P F M Y G M S N E E Y N K L T E D K K E P L L N K F Q I T T S P G T .
Q K I L T A M I G L N N K T L D D K T S Y
Template Known Secondary structure
T T T B S S T T T T S T T T S B . T S T T
Template Predicted Secondary structure
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Template SS confidence
346 . . . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . .
89 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
K V D I S Q T P E M K G V Y S R .
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V R L N S E I S R K D M L L L A L M S S E N R A A A S L A H H Y P G G Y K A F I K A M N A K A K S L G M
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
K I D G K G W Q K D K S W G G Y N V T R Y E V V N G N I D L K Q A .
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I E S S D N I F F A R V A L E L G .
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S K K F E K G M K K L G V
Template Known Secondary structure
S S S S G G G T T S S . . . . T T . . . . . . T T
Template Predicted Secondary structure
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Template SS confidence
426 . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
