Job Description P0AFI5 Confidence 98.21% Date Thu Jan 5 11:26:25 GMT 2012 Rank 84 Aligned Residues 145 % Identity 19% Template c1ei5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-aminopeptidase; PDBTitle: crystal structure of a d-aminopeptidase from ochrobactrum2 anthropi Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.											.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	A	S	G	S	A	M	I	V	D	L	N	T	N	K	V	I	Y	S	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	V	R	P	I	A	S	I	S	K	L	M	T	A	M	V	V	L	.	.	.	.	D	A	R	L	P	L	D	E	K	L	.	.	.	.	.	.	.	.	.	.	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.					.						.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																																																			.
Template Sequence		K	G	P	G	G	V	V	A	V	V	K	.	.	D	G	E	V	V	L	Q	H	A	W	G	F	A	D	L	R	T	R	T	P	M	T	L	D	T	R	M	P	I	C	S	V	S	K	Q	F	T	C	A	V	L	L	D	A	V	G	E	P	E	L	.	L	D	D	A	L	E	A	Y	L	D	K	F	E	D	E	R
Template Known Secondary structure			S	S									.	.	T	T													T	T	T	T					T	T						G	G	G													T		S	G	G	G	.	G								T	T	T			S
Template Predicted Secondary structure													.	.																																																			.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	I	S	Q	T	P	E	M	K	G	V	Y	.	.	.	.	.	.	.	.	.	S	R	V	R	L	N	S	E	I	S	R	K	D	M	L	L	L	A	L	M	S	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	A	A	A	S	L	A	H	H	Y	P	G	G	Y	K	A	F	I
Query Conservation															.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	V	R	D	L	C	N	N	Q	S	G	L	R	D	Y	W	A	L	S	V	L	C	G	A	D	P	E	G	V	F	L	P	A	Q	A	Q	S	L	L	R	R	L	K	T	T	H	F	E	P	G	S	H	Y	S	Y	C	N	G	N	F	R	I	L	A	D	L	I	E	A	H	T	G	R	T	L	V	D	I	L
Template Known Secondary structure									T	T		S												T	T			T	T			B											T					S	S		T	T	S	S																				T	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	M	N	A	K	A	K	S	L	G	M	N	N	T	R	F	V	E	P	T	G	L	S	V	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	A	R	D	L	T	K	L	L	I	A	S	K
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	E	R	I	F	A	P	A	G	M	K	R	A	E	L	I	S	D	T	A	L	F	D	E	C	T	G	Y	E	G	D	T	V	R	G	F	L	P	A	T	N	R	I	Q	W	M	G	D	A	G	I	C	A	S	L	N	D	M	I	A	W	E	Q	F	I	D
Template Known Secondary structure		.	.				T					T		T	T						B	G	G	G			S	S							T	T	T									B	B			S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions