Return to main results Retrieve Phyre Job Id

Job DescriptionP0C058
Confidence99.94%DateWed Jan 25 15:20:35 GMT 2012
Rank1Aligned Residues135
% Identity22%Templated1gmea_
SCOP infoHSP20-like chaperones HSP20-like chaperones HSP20
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.... ....10.........20.........30.. .......40.........50.........60..... ....70.
Predicted Secondary structure 




.














.......











.
Query SS confidence 




.


























. . . . . . .
































.





Query Sequence  MRNFD. LSPLMRQWIGFDKLANALQNAGESQSF. . . . . . . PPYNIEKSDDNHYRITLALAGFRQEDLEIQLEG. TRLSVK
Query Conservation 

  
.  

 
    


              .......

  
       
 
   


   


 
 
  .  
 
 
Alig confidence 




.


























.......







.























.





Template Conservation   
     
 
                                 

 
 .     
   


   


 
 
     
 
 
Template Sequence  VRRSNVFDPFADLWADPFDTFRSIVPAISGGGSETAAFANARMDWKET. PEAHVFKADLPGVKKEEVKVEVEDGNVLVVS
Template Known Secondary structure 

S


B
TT
GGGSSGGGTTSS

SGGG

.SS
TT

GGGTTT
Template Predicted Secondary structure 






















.









Template SS confidence 















































































   4.....10.........20.........30.........40.........50. ........60.........70.........80..
 
   72....... 80.........90.........100..... ....110.........120.........130......
Predicted Secondary structure 




..









..












Query SS confidence 







. .

























. .






























Query Sequence  GTPEQPKE. . EKKWLHQGLMNQPFSLSFTLAENMEV. . SGATFVNGLLHIDLIRNEPEPIAAQRIAISE
Query Conservation 
       ..       
     
 
   

  

 ..  
    


 
  

        


 
  
Alig confidence 







..

























..






























Template Conservation                   
     
 
   

  

   
 
   



 
  

          
 
 
Template Sequence  GERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG
Template Known Secondary structure 







TT


S








SS


GGG
TT




TT








Template Predicted Secondary structure 



























Template SS confidence 




































































   83......90.........100.........110.........120.........130.........140.........150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions