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Job DescriptionP0C058
Confidence96.78%DateWed Jan 25 15:20:35 GMT 2012
Rank17Aligned Residues75
% Identity16%Templatec3eudE_
PDB info PDB header:nuclear proteinChain: E: PDB Molecule:protein shq1; PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50....... ..60.........70.........80.........90.........100... ....
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Query Sequence  PPYNIEKSDDNHYRITLALAGFRQE. . DLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENM. . . EVSG
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Template Sequence  PRFSITQD. EEFIFLKIFISNIRFSAVGLEIIIQENXIIFHL. . . . . SP. . . . . . . . . . . . . YYLRLRFPHELIDDERST
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   4.....10. ........20.........30.........40.... .. ...50.........60....
 
   108.110 .........120......
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Query Sequence  ATF. . VNGLLHIDLIRNEPEP
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Template Sequence  AQYDSKDECINVKVAKLNKNE
Template Known Secondary structure  TTTTSSTT
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   65....70.........80.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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