 |
Job Description | P0AFT5 | Confidence | 61.95% | Date | Thu Jan 5 11:27:13 GMT 2012 |
Rank | 158 | Aligned Residues | 91 |
% Identity | 13% | Template | d3bula2 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.30 |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
D | D | E | P | L | A | R | E | N | L | R | V | F | L | Q | E | Q | S | D | I | E | I | . |
V | G | E | C | S | N | A | V | E | G | I | G | A | V | H | K | L | R | P | D | V | L | F | L | D | I | Q | M | P | R | . |
. |
I | S | G | L | E | M | V | G | M | L | D | P | E | H | R | P | Y | I | V | F | L | T | A | . |
. |
Query Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
| . | . |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|
|   |
Template Sequence |   |
D | V | H | D | I | G | K | N | I | V | G | V | V | L | Q | C | N | N | Y | E | I | V | D | L | G | V | M | V | P | A | E | K | I | L | R | T | A | K | E | V | N | A | D | L | I | G | L | S | G | L | I | T | P | S | L | D | E | M | V | N | V | A | K | E | M | E | R | Q | G | F | T | I | P | L | L | I | G | G | A | T |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
|
| S | S | B |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
| S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  | S | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
757 | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
F | D | E | Y | A | I | K | A | F | E | E | H | A | F | D | Y |
Query Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
Template Sequence |   |
T | S | K | A | H | T | A | V | K | I | E | Q | N | Y | S | G | P | T | V | Y |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | T | G | G | G |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
837 | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|