Job Description P0AFT5 Confidence 47.18% Date Thu Jan 5 11:27:13 GMT 2012 Rank 186 Aligned Residues 117 % Identity 13% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																												.																																			.	.	.	.	.	.	.
Query SS confidence																												.																																			.	.	.	.	.	.	.
Query Sequence		V	L	I	V	D	D	E	P	L	A	R	E	N	L	R	V	F	L	Q	E	Q	S	D	I	E	I	.	V	G	E	C	S	N	A	V	E	G	I	G	A	V	H	K	L	R	P	D	V	L	F	L	D	I	Q	M	P	R	I	S	G	L	.	.	.	.	.	.	.	E	M	V	G	M	L	D	P	E	H	R	P
Query Conservation																												.																																			.	.	.	.	.	.	.
Alig confidence																												.																									.										.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		V	L	V	A	D	V	P	V	E	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y	G	R	G	Y	T	Y	L	.	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	I	E	K	L	K	E	Y	H	A	A
Template Known Secondary structure					T	T			G	G	G											T	T									T	T															S					.		S	S	S	S				S	S	S														T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		76	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.											.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure									.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	V	F	L	T	A	.	.	F	D	E	Y	A	I	K	A	F	E	E	H	A	F	D	Y	L	L	K	P	.	.	.	.	.	.	.	.	.	.	I	D	E	A	R	L	E	K	T	L	A	R	L	R	Q	E	R	S	K
Query Conservation									.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	L	Q	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	K	N	L	A	S	P	K	Q	M	L	A	E	L	R	S	F	V	S	A	M	K	A
Template Known Secondary structure							S	S			S										T	T		S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions