Job Description P0AFT5 Confidence 99.91% Date Thu Jan 5 11:27:13 GMT 2012 Rank 34 Aligned Residues 121 % Identity 18% Template d1k66a_ SCOP info Flavodoxin-like CheY-like CheY-related Resolution 1.75

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	K	V	L	I	V	D	D	E	P	L	A	R	E	N	L	R	V	F	L	Q	E	Q	S	D	I	E	I	V	G	E	C	S	N	A	V	E	G	I	G	A	V	H	K	L	.	.	.	.	.	.	.	.	.	.	R	P	D	V	L	F	L	D	I	Q	M	P	R	I	S	G	L	E	M	V	G	M	L	D
Query Conservation																																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Q	P	L	L	V	V	E	D	S	D	E	D	F	S	T	F	Q	R	L	L	Q	R	E	G	V	V	N	P	I	Y	R	C	I	T	G	D	Q	A	L	D	F	L	Y	Q	T	G	S	Y	C	N	P	D	I	A	P	R	P	A	V	I	L	L	D	L	N	L	P	G	T	D	G	R	E	V	L	Q	E	I	K
Template Known Secondary structure		T	S																						T	T	B		S							S										T			S	S	S		G	G	G					S						S			S	S	S										T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		71	.	.	.				.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure						.	.	.										.	.
Query SS confidence						.	.	.										.	.
Query Sequence		P	E	H	R	.	.	.	P	Y	I	V	F	L	T	A	F	.	.	D	E	Y	A	I	K	A	F	E	E	H	A	F	D	Y	L	L	K	P	I	D	E	A	R	L	E	K	T	L	A	R	L	R	Q	E	R	S	K
Query Conservation						.	.	.										.	.
Alig confidence						.	.	.										.	.
Template Conservation
Template Sequence		Q	D	E	V	L	K	K	I	P	V	V	I	M	T	T	S	S	N	P	K	D	I	E	I	C	Y	S	Y	S	I	S	S	Y	I	V	K	P	L	E	I	D	R	L	T	E	T	V	Q	T	F	I	K	Y	W	L	D
Template Known Secondary structure		T	S	T	T	G	G	G	S							S													T	T		S							S	S																	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions