Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFT5
Confidence36.54%DateThu Jan 5 11:27:13 GMT 2012
Rank210Aligned Residues83
% Identity12%Templatec3navB_
PDB info PDB header:lyaseChain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50...... ...60.........70.... .....80. ...
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Query Sequence  AVEGIGAVHKLRPDVLFLDIQ. . . . . . . . . . . . . . . . . . . . . . MPRISGLEMVGMLDPEHR. PYIVFLT. . . . . . . . AFD
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Template Sequence  SLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID
Template Known Secondary structure  TT
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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   85....90.........100.........110........
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Query Sequence  EYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQE
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Template Sequence  DFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKF
Template Known Secondary structure  T

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GGG
T
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   113......120.........130.........140......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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