Job Description P0AFT5 Confidence 99.89% Date Thu Jan 5 11:27:13 GMT 2012 Rank 64 Aligned Residues 116 % Identity 17% Template c3ilhA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii Resolution 2.59 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																															.	.	.	.	.																												.	.	.
Query SS confidence																																															.	.	.	.	.																												.	.	.
Query Sequence		M	I	K	V	L	I	V	D	D	E	P	L	A	R	E	N	L	R	V	F	L	Q	E	Q	S	D	I	E	I	V	G	E	C	S	N	A	V	E	G	I	G	A	V	H	K	.	.	.	.	.	L	R	P	D	V	L	F	L	D	I	Q	M	P	R	I	S	G	L	E	M	V	G	M	L	D	P	E	.	.	.
Query Conservation																																															.	.	.	.	.																												.	.	.
Alig confidence																																															.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		I	D	S	V	L	L	I	D	D	D	D	I	V	N	F	L	N	T	T	I	I	R	M	T	H	R	V	E	E	I	Q	S	V	T	S	G	N	A	A	I	N	K	L	N	E	L	Y	A	A	G	R	W	P	S	I	I	C	I	D	I	N	M	P	G	I	N	G	W	E	L	I	D	L	F	K	Q	H	F	Q	P
Template Known Secondary structure										S														T	T										S	S													T	S	S				S						S	S		S	S	S														G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
				73	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure		.	.												.	.	.
Query SS confidence		.	.												.	.	.
Query Sequence		.	.	H	R	P	Y	I	V	F	L	T	A	F	.	.	.	D	E	Y	A	I	K	A	F	E	E	H	A	F	D	Y	L	L	K	P	I	D	E	A	R	L	E	K	T	L	A	R	L	R
Query Conservation		.	.												.	.	.
Alig confidence		.	.												.	.	.
Template Conservation
Template Sequence		M	K	N	K	S	I	V	C	L	L	S	S	S	L	D	P	R	D	Q	A	K	A	E	A	S	D	W	V	D	Y	Y	V	S	K	P	L	T	A	N	A	L	N	N	L	Y	N	K	V	L
Template Known Secondary structure		G	T	T	T								S	S													S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions