Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFT5
Confidence99.90%DateThu Jan 5 11:27:13 GMT 2012
Rank45Aligned Residues120
% Identity32%Templatec3hdgE_
PDB info PDB header:structural genomics, unknown functionChain: E: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of an2 uncharacterized protein (ws1339) from wolinella3 succinogenes
Resolution2.27 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.... .....80
Predicted Secondary structure 


























.

Query SS confidence 








































































.





Query Sequence  IKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHR. PYIVFL
Query Conservation    





       
   
        
       


        






 


  
      
     .  

 
Alig confidence 
























..













































.





Template Conservation   






       
   
   
 .. 
  
    

         



 
       
      
        

 
Template Sequence  LKILIVEDDTDAREWLSTIISNHFP. . EVWSAGDGEEGERLFGLHAPDVIITDIRXPKLGGLEXLDRIKAGGAKPYVIVI
Template Known Secondary structure 


S

S..SSS

S
SS
SSS
TT



Template Predicted Secondary structure 






..





















Template SS confidence 















































































   910.........20.........30... ......40.........50.........60.........70.........80......
 
   81. .......90.........100.........110.........120...
Predicted Secondary structure 
..










Query SS confidence 

. .








































Query Sequence  TA. . FDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQD
Query Conservation 
 ..       
   

 


 

     
   
           
Alig confidence 

..








































Template Conservation 
              
    
 

     
   
          
Template Sequence  SAFSEXKYFIKAIELGVHLFLPKPIEPGRLXETLEDFRHIKLAKE
Template Known Secondary structure 


S


S

SS

T
Template Predicted Secondary structure 












Template SS confidence 












































   87..90.........100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions