Job Description P0AFT5 Confidence 99.62% Date Thu Jan 5 11:27:13 GMT 2012 Rank 116 Aligned Residues 104 % Identity 24% Template c3d6wA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:methyl-accepting/dna response regulator; PDBTitle: lyttr dna-binding domain of putative methyl-accepting/dna response2 regulator from bacillus cereus. Resolution 2.40 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		L	K	F	I	P	C	T	G	H	S	R	I	Y	L	L	Q	M	K	D	V	A	F	V	S	S	R	M	S	G	V	Y	V	T	S	H	E	G	K	E	G	F	T	E	L	T	L	R	T	L	E	S	R	T	P	.	.	.	L	L	R	C	H	R	Q	Y	L	V	N	L	A	H	L	Q	E	I	R	L	E	D	N
Query Conservation																																																								.	.	.
Alig confidence																																							.																	.	.	.
Template Conservation																																							.
Template Sequence		K	S	V	V	T	L	K	T	T	D	G	W	I	P	V	P	F	S	K	V	X	Y	L	E	A	K	D	K	K	T	Y	V	N	A	E	E	L	.	T	G	T	H	K	Y	S	L	Q	E	F	E	Y	L	L	P	K	D	S	F	I	R	C	H	R	S	F	I	V	N	V	N	H	I	K	A	I	Y	P	D	T	H
Template Known Secondary structure										S	S	S						G	G	G								T	T							S	S		.					S	S									S		T	T	T						T	T					G	G	G								S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	E	L	I	L	R	N	G	L	T	V	P	V	S	R	R	Y	L	K	S	L	K	E	A	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	F	L	L	S	X	D	N	G	E	R	V	P	V	S	Q	S	Y	A	S	Y	F	R	K	L	L	G
Template Known Secondary structure		S							T	T	S							T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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