Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFT5
Confidence33.00%DateThu Jan 5 11:27:13 GMT 2012
Rank219Aligned Residues90
% Identity9%Templatec3c85A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  VLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAF
Query Conservation 





       
   
        
       


        






 


  
      
       

 

  
Alig confidence 




















....






















































Template Conservation 


                  ....
 

      
        
  

     
  
       
       


    
Template Sequence  SLGIEIREEAAQQHRSEGRNV. . . . ISGDATDPDFWERILDTGHVKLVLLAXPHHQGNQTALEQLQRRNYKGQIAAIAEY
Template Known Secondary structure  S
TT

....

TT
TB
S






SSTT

SSS
Template Predicted Secondary structure 






....


















Template SS confidence 















































































   62.......70.........80.. .......90.........100.........110.........120.........130.......
 
   84.....90.......
Predicted Secondary structure 



Query SS confidence 













Query Sequence  DEYAIKAFEEHAFD
Query Conservation        
   

 
Alig confidence 













Template Conservation        
   


 
Template Sequence  PDQLEGLLESGVDA
Template Known Secondary structure  T
S
Template Predicted Secondary structure 



Template SS confidence 













   138.140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions