Job Description P0AFT5 Confidence 99.37% Date Thu Jan 5 11:27:13 GMT 2012 Rank 118 Aligned Residues 99 % Identity 18% Template c3bs1A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:accessory gene regulator protein a; PDBTitle: structure of the staphylococcus aureus agra lyttr domain2 bound to dna reveals a beta fold with a novel mode of3 binding Resolution 1.60 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																												.
Query SS confidence																																.	.																												.
Query Sequence		Q	Q	A	L	K	F	I	P	C	T	G	H	S	R	I	Y	L	L	Q	M	K	D	V	A	F	V	S	S	R	M	.	.	S	G	V	Y	V	T	S	H	E	G	K	E	G	F	T	E	L	T	L	R	T	L	E	S	R	T	P	.	L	L	R	C	H	R	Q	Y	L	V	N	L	A	H	L	Q	E	I	R	L
Query Conservation																																.	.																												.
Alig confidence																																.	.											.																	.
Template Conservation																																												.
Template Sequence		D	N	S	V	E	T	I	E	L	K	R	G	S	N	S	V	Y	V	Q	Y	D	D	I	M	F	F	E	S	S	T	K	S	H	R	L	I	A	H	L	D	N	R	.	Q	I	E	F	Y	G	N	L	K	E	L	S	Q	L	D	D	R	F	F	R	C	H	N	S	F	V	V	N	R	H	N	I	E	S	I	D	S
Template Known Secondary structure				S	S								T	T							G	G	G								S	S	T	T							S	S		.																T	T						T	T					G	G	G						T
Template Predicted Secondary structure																																												.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	N	G	Q	A	E	L	I	L	R	N	G	L	T	V	P	V	S	R	R	Y	L	K	S	L
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		K	E	R	.	.	.	I	V	Y	F	K	N	K	E	H	C	Y	A	S	V	R	N	V	K	K	I
Template Known Secondary structure		T	T	T	.	.	.					T	T	S							T	T	T	G	G	G
Template Predicted Secondary structure					.	.	.
Template SS confidence
		216	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions