Job Description P0AFT5 Confidence 96.70% Date Thu Jan 5 11:27:13 GMT 2012 Rank 122 Aligned Residues 118 % Identity 19% Template c2vycA_ PDB info PDB header:lyase Chain: A: PDB Molecule:biodegradative arginine decarboxylase; PDBTitle: crystal structure of acid induced arginine decarboxylase2 from e. coli Resolution 2.4 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.									.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.																																	.														.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.																																	.														.	.	.	.
Query Sequence		I	K	V	L	I	V	D	D	E	P	L	A	R	.	.	.	.	.	.	.	.	E	N	L	R	V	F	L	Q	E	Q	S	D	I	E	I	V	G	E	C	S	N	A	V	E	G	I	G	A	V	H	K	L	.	R	P	D	V	L	F	L	D	I	Q	M	P	R	.	.	.	.	I	S	G	L	E	M	V	G	M
Query Conservation															.	.	.	.	.	.	.	.																																	.														.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.													.	.																			.														.	.	.	.
Template Conservation																																			.	.
Template Sequence		M	K	V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	.	.	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K
Template Known Secondary structure										T	T	S	T	T	S																	T	T		.	.						S	S									T	T	T				S										S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		69	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure								.											.	.	.																									.
Query SS confidence								.											.	.	.																									.
Query Sequence		L	D	P	E	H	R	.	P	Y	I	V	F	L	T	A	F	D	.	.	.	E	Y	A	I	K	A	F	E	E	H	A	F	D	Y	L	L	K	P	I	D	E	A	R	L	.	E	K	T	L	A	R	L	R	Q	E	R	S	K
Query Conservation								.											.	.	.																									.
Alig confidence								.											.	.	.																									.
Template Conservation
Template Sequence		L	H	E	R	Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M	T	R	Y	R	Q
Template Known Secondary structure						S	T	T															T		S								S					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions