Job Description P0AFT5 Confidence 54.26% Date Thu Jan 5 11:27:13 GMT 2012 Rank 176 Aligned Residues 82 % Identity 6% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		I	K	V	L	I	V	D	D	E	P	L	A	R	E	N	L	R	V	F	L	Q	E	Q	S	D	I	E	I	V	G	E	C	S	N	A	V	E	G	I	G	A	V	H	K	.	.	L	R	P	D	V	L	F	L	D	I	Q	M	P	R	I	S	G	L	E	M	V	G	M	L	D	P	E	H	R	P	Y	I	V	F
Query Conservation																																														.	.
Alig confidence																									.																					.	.									.	.	.	.	.	.	.	.
Template Conservation																									.																															.	.	.	.	.	.	.	.
Template Sequence		L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	.	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	.	.	.	.	.	.	.	.	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S
Template Known Secondary structure									S																.	T																					T	T	T		S					.	.	.	.	.	.	.	.										T	T		S	S
Template Predicted Secondary structure																									.																															.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	F	D	E	Y	A	I	K	A	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	V	T	R	F	D	T	M	R	A	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions