Job Description P0AFT5 Confidence 99.91% Date Thu Jan 5 11:27:13 GMT 2012 Rank 33 Aligned Residues 117 % Identity 25% Template c2jrlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		M	I	K	V	L	I	V	D	D	E	P	L	A	R	E	N	L	R	V	F	L	Q	E	Q	S	D	I	E	I	V	G	E	C	S	N	A	V	E	G	I	G	A	V	H	K	L	R	P	D	V	L	F	L	D	I	Q	M	P	R	I	S	G	L	E	M	V	G	M	L	D	P	E	H	R	.	P	Y	I	V	F
Query Conservation																																																																												.
Alig confidence																												.	.																																															.
Template Conservation																												.	.
Template Sequence		M	K	R	V	L	V	V	D	D	E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	.	.	H	P	D	T	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	V	W	M	P	D	G	D	G	V	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	I	V
Template Known Secondary structure				B						S															T	T		.	.	B					S										T	T	S			S						S			S	S	S		S	T	T	T									S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		L	T	A	F	.	.	D	E	Y	A	I	K	A	F	E	E	H	A	F	D	Y	L	L	K	P	I	D	E	A	R	L	E	K	T	L	A	R	L	R	Q	E	R
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		I	T	G	H	G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	F	L	E	K	P	F	S	V	E	R	F	L	L	T	I	K	H	A	F	E	E	Y
Template Known Secondary structure				S	S													T							S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions