Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFT5
Confidence34.29%DateThu Jan 5 11:27:13 GMT 2012
Rank216Aligned Residues91
% Identity12%Templatec1bmtB_
PDB info PDB header:methyltransferaseChain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20......... 30.........40.........50......... 60.........70.........80..
Predicted Secondary structure 






.













..







..
Query SS confidence 





















.





























. .






















. .
Query Sequence  DDEPLARENLRVFLQEQSDIEI. VGECSNAVEGIGAVHKLRPDVLFLDIQMPR. . ISGLEMVGMLDPEHRPYIVFLTA. .
Query Conservation 

       
   
        .
       


        






 


..  
      
       

 

 ..
Alig confidence 





















.





























..






















..
Template Conservation 
 



  

   
   
  
  

  

 
  
        
 



 
           
  
   
    
 



 
Template Sequence  DVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGAT
Template Known Secondary structure 



TTS


SS

T
S

STT

S
STT
Template Predicted Secondary structure 




























Template SS confidence 















































































   757..760.........770.........780.........790.........800.........810.........820.........830......
 
   83......90.. ......
Predicted Secondary structure  .
...



Query SS confidence  .









. . .





Query Sequence  . FDEYAIKAFE. . . EHAFDY
Query Conservation  .       
  ... 

 

Alig confidence  .









...





Template Conservation                 


  
Template Sequence  TSKAHTAVKIEQNYSGPTVY
Template Known Secondary structure 

TTGGG
SS
Template Predicted Secondary structure 





Template SS confidence 



















   837..840.........850......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions