Job Description P33366 Confidence 2.56% Date Thu Jan 5 11:52:07 GMT 2012 Rank 24 Aligned Residues 104 % Identity 13% Template c3qnqD_ PDB info PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system Resolution 3.29 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																			.	.	.	.	.
Predicted Secondary structure																							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	H	P	Y	L	F	V	I	G	T	R	F	M	Y	G	F	R	V	I	G	.	P	T	L	I	G	A	S	Q	L	P	P	K	I	F	L	P	L	N	I	L	G	A	F	A	W	A	L	I	F	T	T	I	G	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	V	I
Query Conservation																							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	Q	Q	L	K	S	L	G	R	L	S	I	A	P	G	I	F	N	I	N	E	M	V	T	F	G	M	P	I	V	M	N	P	L	L	L	I	P	F	I	V	V	P	V	V	L	T	I	V	S	Y	F	A	M	E	W	G	L	V	A	R	P	S	G	A	A	V	T	W	T	T	P	I	L	F	S	G	Y	L
Template Known Secondary structure			S										T	S					T	T									T	T		T	T		T	T	T																					T	T	S	S					S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	W	L	H	N	L	D	Q	H	L	K	H	W	V	W	L	I	L	V	V	V	L	V	V	G	V	R	W	W	L	K	R	R	G	K	K	K	P	D	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	G	G	K	I	S	G	V	I	L	Q	L	V	N	F	A	L	A	F	V	I	Y	L	P	F	L	K	I	W	D	K	Q	K	I	A	E	E	K	G	E	A	A
Template Known Secondary structure		T	T	T	T		T	T	T																															T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions