Job Description P33366 Confidence 5.46% Date Thu Jan 5 11:52:07 GMT 2012 Rank 11 Aligned Residues 130 % Identity 8% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	E	T	V	T	L	L	G	G	V	A	A	H	Q	G	L	L	K	F	P	L	V	V	L	S	V	A	L	G	G	M	I	G	D	Q	V	L	Y	L	C	G	R	R	F	G	G	K	L	L	R	R	F	S	K	H	Q	D	K	I	E	R	A	Q	K	L	I	Q	R	H	P	Y	L	F	V	I	G	T	R	F
Query Conservation
Alig confidence														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	D	V	P	S	L	L	A	T	F	T	.	.	.	.	.	F	G	P	V	A	G	I	I	V	A	L	V	K	N	L	L	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	S	M	G	D	P	V	G	P	F	A	N	F	L
Template Known Secondary structure		G	G	G								T	T	.	.	.	.	.	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T		S	S
Template Predicted Secondary structure														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																															.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		M	Y	G	F	R	V	I	G	P	T	L	I	G	A	S	Q	L	P	P	K	I	F	L	P	L	N	I	L	G	A	F	A	W	A	L	I	F	T	T	I	G	Y	A	G	G	Q	V	I	A	P	W	L	H	.	.	N	L	D	Q	H	L	K	H	W	V	W	L	I	L	V	V	V	L	V	V	G	V	R	W	W
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L	L	Y	R	R
Template Known Secondary structure															S	S	S		S																								T	T	T	T	T																																		T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	R	R	G	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	N	F	L	K	R
Template Known Secondary structure		T					T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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