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Job DescriptionP15038
Confidence96.69%DateThu Jan 5 11:34:22 GMT 2012
Rank125Aligned Residues109
% Identity17%Templatec3fhcB_
PDB info PDB header:transport protein/hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of human dbp5 in complex with nup214
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200........ .210.........220.........230.........240.........250.........260.......
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Query Sequence  SPLNPAQARAVVNG. . . . EHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHT. . .
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Template Sequence  NRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPAN. KYPQCLCLSPTYELALQTGKVIEQMGKFYPE
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   113......120.........130.........140.........150.........160 .........170.........180.........190.
 
   268.270.........280.........290.........300....
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Query Sequence  . . . . . . . . . . . . . . . . . . . EDITARTFHALALHIIQQGSKKVPIVSKLENDTAARH
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Template Sequence  LKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVM
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   192.......200.........210.........220.........230.........240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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