Job Description P15038 Confidence 97.83% Date Thu Jan 5 11:34:22 GMT 2012 Rank 53 Aligned Residues 169 % Identity 12% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	W	S	G	E	M	S	E	I	A	S	G	V	L	R	Q	Q	L	D	L	I	A	T	R	T	G	E	N	K	W	L	T	R	E	Q	T	S	G	V	Q	Q	Q	I	R	Q	A	L	S	A	L	P	L	P	V	N	R	L	E	E	F	D	N	C	R	E	A	W	R	K	C	Q	A	W	L	K	D	I	E	S
Query Conservation
Alig confidence																																																																	.	.
Template Conservation																																																																	.	.
Template Sequence		F	G	K	L	R	E	K	L	K	S	F	V	K	R	V	E	E	E	V	E	K	E	E	E	E	V	E	L	T	V	E	I	K	E	K	D	V	D	K	A	L	D	E	L	E	I	D	L	L	E	A	D	V	A	L	E	V	V	D	A	L	R	E	.	.	K	I	K	Q	K	L	V	G	K	K	V	R	I	G	T
Template Known Secondary structure																									T	T																									T	T	T												.	.							T	T					T	T	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	Q	H	N	Q	A	Y	T	E	A	M	L	T	E	Y	A	D	F	F	R	Q	V	E	S	S	P	L	N	P	A	Q	A	R	A	V	V	N	G	E	H	S	L	L	V	L	A	G	A	G	S	G	K	T	S	V	L	V	A	R	A	G	W	L	L	A	R	G	E	A	S	P	E	Q	I	L	L	L	A
Query Conservation
Alig confidence																					.	.	.	.	.																																															.	.	.	.
Template Conservation																					.	.	.	.	.																																															.	.	.	.
Template Sequence		D	K	G	K	I	I	E	E	A	V	K	E	A	V	S	E	I	L	E	.	.	.	.	.	T	S	R	R	I	D	L	I	E	E	I	R	K	A	E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	N	H	G	F	.	.	.	.	S	V	V	I	A	A
Template Known Secondary structure																			T		.	.	.	.	.		S											T	S		S										T	T	S	S															T	T		.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.																																															.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.
		249			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		F	.	.	G	R	K	A	A	E	E	M	D	E	R	I	R	E	R	L	H	T	E
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K
Template Known Secondary structure				T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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