Return to main results Retrieve Phyre Job Id

Job DescriptionP15038
Confidence95.16%DateThu Jan 5 11:34:22 GMT 2012
Rank229Aligned Residues21
% Identity29%Templatec2zamA_
PDB info PDB header:protein transportChain: A: PDB Molecule:vacuolar protein sorting-associating protein 4b; PDBTitle: crystal structure of mouse skd1/vps4b apo-form
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230...
Predicted Secondary structure 





Query SS confidence 




















Query Sequence  LVLAGAGSGKTSVLVARAGWL
Query Conservation 

 







 


 

  
Alig confidence 




















Template Conservation 

 







 

 


   
Template Sequence  LLFGPPGTGKSYLAKAVATEA
Template Known Secondary structure 
STTS
T
Template Predicted Secondary structure 





Template SS confidence 




















   171........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions