Job Description P15038 Confidence 98.13% Date Thu Jan 5 11:34:22 GMT 2012 Rank 37 Aligned Residues 73 % Identity 22% Template c2z0mA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:337aa long hypothetical atp-dependent rna PDBTitle: crystal structure of hypothetical atp-dependent rna2 helicase from sulfolobus tokodaii Resolution 1.90 Å

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		197	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	N	P	A	Q	A	R	A	V	.	.	V	N	G	E	H	S	L	L	V	L	A	G	A	G	S	G	K	T	S	V	L	V	A	R	A	G	W	L	L	A	R	G	E	A	S	P	E	Q	I	L	L	L	A	F	G	R	K	A	A	E	E	M	D	E	R	I	R	E	R	L	H	T	E	D	I	T	A	R	T
Query Conservation											.	.
Alig confidence											.	.																						.	.	.										.	.	.	.
Template Conservation																																		.	.	.										.	.	.	.
Template Sequence		F	T	E	V	Q	S	K	T	I	P	L	M	L	Q	G	K	N	V	V	V	R	A	K	T	G	S	G	K	T	A	A	Y	.	.	.	A	I	P	I	L	E	L	G	M	.	.	.	.	K	S	L	V	V	T	P	T	R	E	L	T	R	Q	V	A	S	H	I	R	D	I	G	R	Y	M	D	T	K	V	A	E
Template Known Secondary structure															T	T									T	T	S	S						.	.	.								T		.	.	.	.							S	S															T	T	T	S
Template Predicted Secondary structure																																		.	.	.										.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		275	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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