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Job DescriptionP15038
Confidence97.57%DateThu Jan 5 11:34:22 GMT 2012
Rank71Aligned Residues151
% Identity19%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  SGVLRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHNQAYTE
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Template Sequence  FQQLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVRE. . EALGKQVLESLTPAEVILATVY
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   2.......10.........20.........30.........40.........50....... ..60.........70.........
 
   180.........190.........200.........210.........220.........230.........240....... ..250......
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Query Sequence  AMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLL. . . AFGRKAAEE
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Template Sequence  EALKEA. . . . . . . . . . . LGGEARLPVLKDRNLWFLVGLQGSGKTTTAAKLALYYKGKGR. . . . RPLLVAADTQRPAAREQ
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   80..... ....90.........100.........110.........120....... ..130.........140....
 
   257..260........
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Query Sequence  MDERIRERLHTE
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Template Sequence  LRL. LGEKVGVP
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   145.. ..150.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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