Job Description P15038 Confidence 98.07% Date Thu Jan 5 11:34:22 GMT 2012 Rank 40 Aligned Residues 78 % Identity 22% Template c2db3D_ PDB info PDB header:hydrolase/rna Chain: D: PDB Molecule:atp-dependent rna helicase vasa; PDBTitle: structural basis for rna unwinding by the dead-box protein2 drosophila vasa Resolution 2.20 Å

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		197	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure											.	.																					.																		.	.	.
Query SS confidence											.	.																					.																		.	.	.
Query Sequence		L	N	P	A	Q	A	R	A	V	.	.	V	N	G	E	H	S	L	L	V	L	A	G	A	G	S	G	K	T	S	V	.	L	V	A	R	A	G	W	L	L	A	R	G	E	A	S	P	E	.	.	.	Q	I	L	L	L	A	F	G	R	K	A	A	E	E	M	D	E	R	I	R	E	R	L	H	T	E	D	I
Query Conservation											.	.																					.																		.	.	.
Alig confidence											.	.																					.																		.	.	.
Template Conservation
Template Sequence		P	T	P	I	Q	K	C	S	I	P	V	I	S	S	G	R	D	L	M	A	C	A	Q	T	G	S	G	K	T	A	A	F	L	L	P	I	L	S	K	L	L	E	D	P	H	E	L	E	L	G	R	P	Q	V	V	I	V	S	P	T	R	E	L	A	I	Q	I	F	N	E	A	R	K	F	A	F	E	S	Y	L
Template Known Secondary structure															T	T									T	T	S																	S					B	T	T	B		S						S	S															T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		271	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	G	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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