Job Description P15038 Confidence 97.82% Date Thu Jan 5 11:34:22 GMT 2012 Rank 54 Aligned Residues 77 % Identity 22% Template c1s2mA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:putative atp-dependent rna helicase dhh1; PDBTitle: crystal structure of the dead box protein dhh1p Resolution 2.10 Å

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		197	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	N	P	A	Q	A	R	A	V	.	.	V	N	G	E	H	S	L	L	V	L	A	G	A	G	S	G	K	T	S	V	L	V	A	R	A	G	W	L	L	A	R	G	E	A	S	P	E	Q	I	L	L	L	A	F	G	R	K	A	A	E	E	M	D	E	R	I	R	E	R	L	H	T	E	D	I	T	A	R	T
Query Conservation											.	.
Alig confidence											.	.																																		.
Template Conservation																																														.
Template Sequence		P	S	P	I	Q	E	E	A	I	P	V	A	I	T	G	R	D	I	L	A	R	A	K	N	G	T	G	K	T	A	A	F	V	I	P	T	L	E	K	V	K	P	K	L	.	N	K	I	Q	A	L	I	M	V	P	T	R	E	L	A	L	Q	T	S	Q	V	V	R	T	L	G	K	H	C	G	I	S	C	M	V
Template Known Secondary structure																T									T	T	S																T	T	S	.		S								S	S															T	T	T	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions