Return to main results Retrieve Phyre Job Id

Job DescriptionP33360
Confidence96.68%DateThu Jan 5 11:52:02 GMT 2012
Rank171Aligned Residues105
% Identity27%Templated1p9ra_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  QEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQK
Query Conservation    

   
 
 








  
 
      
 
 
 
                            

            
Alig confidence 























































........................
Template Conservation     




 
 








 
 
         
 




 
       
      ........................
Template Sequence  RPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPR. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSS
STTS


TTS
SS

S

SSS
BGG........................
Template Predicted Secondary structure 

























........................
Template SS confidence 















































































   255....260.........270.........280.........290.........300.........310
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  WSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRIHRLL
Query Conservation                    
           

 
   

 

 

   
 







  

          
  
    
Alig confidence  ................................

























...












.....
Template Conservation  ................................        
   

 




 




...
 

   
  

 .....
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDXTFARGLRAILRQDPDVVXVGEIR. . . DLETAQIAVQASL. . . . . T
Template Known Secondary structure  ................................GTB
GGG

SS


...S.....T
Template Predicted Secondary structure  ................................












...
.....
Template SS confidence 















































































   311........320.........330...... ...340......... 350
 
   185....190...
Predicted Secondary structure 



Query SS confidence 








Query Sequence  GRTIVLVTH
Query Conservation 
 


 


Alig confidence 








Template Conservation 



 



Template Sequence  GHLVXSTLH
Template Known Secondary structure  T

Template Predicted Secondary structure 






Template SS confidence 








   351........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions