Return to main results Retrieve Phyre Job Id

Job DescriptionP33360
Confidence100.00%DateThu Jan 5 11:52:02 GMT 2012
Rank39Aligned Residues216
% Identity32%Templatec2yl4A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60.........70........
Predicted Secondary structure  ...



































Query SS confidence 









. . .


































































Query Sequence  IEFSHVSKLF. . . GAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMG
Query Conservation 
    
   
...     
  


 
  

   
 
 








  
 
      
 
 
 
                
Alig confidence 









...


































































Template Conservation 
    

  
       

  
 
 
  
    
 
 







   
 
      
 
      
       

  
 
Template Sequence  LEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIG
Template Known Secondary structure 
SS
TTS
TT


TTSSSTTTSS

STTTTTB
S
Template Predicted Secondary structure 








































Template SS confidence 















































































   492.......500.........510.........520.........530.........540.........550.........560.........570.
 
   7980.........90.........100.........110.........120....... ..130.........140.........150.
Predicted Secondary structure 
























.......

















Query SS confidence 
















































. . . . . . .























Query Sequence  YAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMALLGLESNL. . . . . . . RERYPHQLSGGQQQRVGVARALAA
Query Conservation              

                              
    .......       

 
   

 

 

  
Alig confidence 










.




































.......























Template Conservation   
 
   

  .

  

  
           
   
    
   
  

 

 
 
   
  








 





 
Template Sequence  TVSQEPILFSC. SIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLK
Template Known Secondary structure 
SS



SS.BTTSSSTTTS
TT
TSSSGGG
B
SSSS



Template Predicted Secondary structure 









.






























Template SS confidence 















































































   572.......580.. .......590.........600.........610.........620.........630.........640.........650
 
   152.......160.........170.........180.........190.........200.........210.........220.
Predicted Secondary structure 





















Query SS confidence 





































































Query Sequence  DPQVLLMDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLT
Query Conservation   
 







  

          
  
    
 


 


         
 
 

  
 

  
    
Alig confidence 































..














.



















Template Conservation     
 



  
 

      
   
      .. 


 


       . 
 
  
  
 
   
   
Template Sequence  NPKILLLDEATSALDAENEYLVQEALDRLMDG. . RTVLVIAHRLSTIKN. ANMVAVLDQGKITEYGKHEE
Template Known Secondary structure 

S


SS

TT..S


.SSTT
S

Template Predicted Secondary structure 











..



.








Template SS confidence 





































































   651........660.........670.........680.. .......690....... ..700.........710.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions