Return to main results Retrieve Phyre Job Id

Job DescriptionP33360
Confidence100.00%DateThu Jan 5 11:52:02 GMT 2012
Rank57Aligned Residues227
% Identity23%Templatec2ygrD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40..... ....50.........60.........70.........80..
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Query Sequence  SHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLK. . MINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQ
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Template Sequence  RQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLD. KLVRIDQ
Template Known Secondary structure  S
STT

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   625....630.........640.........650.........660.........670.........680.........690...... ...700...
 
   83. .....90.........100.
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Query Sequence  SI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLFPHWSVAQNIATVPQ
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Template Sequence  SPIGRTPRSNPATYTGVFDKIRTLFAATNEAKVRGYKPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGAR
Template Known Secondary structure  S
S
SSTT
STTSTTT

GGGS
TTSTTTB
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S
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   704.....710.........720.........730.........740.........750.........760.........770.........780...
 
   102. ......110.........120.........130.........140.........150..
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Query Sequence  LQ. . . . . . . . . . . . . . . . . . . . . . . . . . KWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAAD. . .
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Template Sequence  YNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTG
Template Known Secondary structure  B
T

BTTB
TSBSTT
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SSSBTT

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S
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   784.....790.........800.........810.........820.........830.........840.........850.........860...
 
   153......160.........170.........180.........190.........200........ .210.........220......
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Query Sequence  PQVLLMDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLM. . . . . . DHGEVVQQGNPLTMLTRP
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Template Sequence  RTVYILDEPTTGLHFDDIRKLLNVINGL. VDKGNTVIVIEHNLDVI. KTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVP
Template Known Secondary structure  S
SSSTT

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   864.....870.........880.........890. ........900........ .910.........920.........930.........940.
 
   227..230....
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Query Sequence  ANDFVRQF
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Template Sequence  ASYTGKFL
Template Known Secondary structure  S
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   942.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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