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Job DescriptionP33360
Confidence100.00%DateThu Jan 5 11:52:02 GMT 2012
Rank8Aligned Residues235
% Identity36%Templatec2olkD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:amino acid abc transporter; PDBTitle: abc protein artp in complex with adp-beta-s
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPV. . LELRRRMG
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Template Sequence  MIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVG
Template Known Secondary structure  SSSS

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STTSSTTSS

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Query Sequence  YAIQSIGLFPHWSVAQNIATVP. QLQKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLL
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Template Sequence  MVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGL. KDKAHAYPDSLSGGQAQRVAIARALAMEPKIML
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Query Sequence  MDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGR
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Template Sequence  FDEPTSALDPEMVGEVLSVMKQLANE. GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSK
Template Known Secondary structure  SSSTTS
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   160.........170.........180..... ....190.........200.........210.........220.........230........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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