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Job DescriptionP33360
Confidence100.00%DateThu Jan 5 11:52:02 GMT 2012
Rank6Aligned Residues267
% Identity34%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60.........70.........80
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Query Sequence  IEFSHVSKLF. GAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYA
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Template Sequence  IEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . KRNVGLV
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TTSTT

TT

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STT
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   15....20.........30.........40.........50.........60.........70.........80..... ....90..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  IQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
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Template Sequence  FQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRL. ESYANRFPHELSGGQQQRVALARALAPRPQVLLFDE
Template Known Secondary structure  TT



TTS
TTGGGTT

TT
.GGGTTS
GGGS
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   93......100.........110.........120.........130..... ....140.........150.........160.........170.
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGRSEL
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Template Sequence  PFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNV
Template Known Secondary structure  TTTTS


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STT
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   241........250.........260.........270.
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Query Sequence  GVRLLSLRSVADYVRREERADGEALAEEMTL
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Template Sequence  WTRAVQNGRIEVAGAALPVDPAVSEGSEVAV
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   252.......260.........270.........280..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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