Return to main results Retrieve Phyre Job Id

Job DescriptionP76156
Confidence6.62%DateThu Jan 5 12:19:48 GMT 2012
Rank96Aligned Residues33
% Identity9%Templatec1q88B_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:39 kda initiator binding protein; PDBTitle: crystal structure of the c-domain of the t.vaginalis inr2 binding protein, ibp39 (monoclinic form)
Resolution2.42 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   67..70.........80.. .......90.........
Predicted Secondary structure 



.






Query SS confidence 















.
















Query Sequence  FSKDRHLIETTSNKLK. SREITFQEYRRNLAKAG
Query Conservation     
   
  

   
.

   
 

    
 

Alig confidence 















.
















Template Conservation   



  


 

       

  

  
 
 

Template Sequence  PKQNAIEVISAIMAPQEEQTKSKADLYKFLAMFG
Template Known Secondary structure 
S

SS

SS
Template Predicted Secondary structure 






Template SS confidence 

































   199200.........210.........220.........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions