Secondary structure and disorder prediction |   |
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Sequence |   |
M | K | K | K | P | V | A | Q | L | E | R | Q | H | S | L | L | E | N | P | C | A | Y | G | L | L | S | Q | F | Q | A | A | I | V | V | N | C | F | T | L | N | K | I | I |
Secondary structure |   |
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SS confidence |   |
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Disorder |   |
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Disorder confidence |   |
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Confidence Key |
High(9) |   |
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Low (0) |
? | Disordered |
  | Alpha helix |
  | Beta strand |
Hover over an aligned region to see model and summary info
Please note, only up to the top 20 hits are modelled to reduce computer load
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1 |
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PDB 2a93 chain B
Region: 6 - 17 Aligned: 12 Modelled: 12 Confidence: 10.6% Identity: 50% PDB header:leucine zippers Chain: B: PDB Molecule:c-myc-max heterodimeric leucine zipper;
PDBTitle: nmr solution structure of the c-myc-max heterodimeric2 leucine zipper, 40 structures
Phyre2
2 |
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PDB 1dip chain A
Region: 6 - 32 Aligned: 27 Modelled: 27 Confidence: 6.4% Identity: 33% PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive
PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures
Phyre2
3 |
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PDB 1u2u chain A
Region: 4 - 21 Aligned: 18 Modelled: 18 Confidence: 6.2% Identity: 50% PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4;
PDBTitle: nmr solution structure of a designed heterodimeric leucine2 zipper
Phyre2
4 |
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PDB 3he5 chain A
Region: 6 - 18 Aligned: 13 Modelled: 13 Confidence: 5.8% Identity: 62% PDB header:de novo protein Chain: A: PDB Molecule:synzip1;
PDBTitle: heterospecific coiled-coil pair synzip2:synzip1
Phyre2
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Detailed template information |   |
Binding site prediction |   |
Due to computational demand, binding site predictions are not run for batch jobs
If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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If you use the binding site
predictions from 3DLigandSite, please also cite: |
3DLigandSite: predicting ligand-binding sites using similar structures. |
Wass MN, Kelley LA and Sternberg
MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed] |
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