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Job DescriptionP0A9P9
Confidence100.00%DateThu Jan 5 11:10:57 GMT 2012
Rank62Aligned Residues248
% Identity34%Templatec2wdzD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of the short chain dehydrogenase2 galactitol-dehydrogenase (gatdh) of rhodobacter3 sphaeroides in complex with nad+ and 1,2-pentandiol
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIE
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Template Sequence  RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAV
Template Known Secondary structure  TTTT

TT
TTTSTT
S
GGG

TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150...... ...
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Query Sequence  KDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTIT. . PYA
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Template Sequence  APVSILVN. . . SAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYM
Template Known Secondary structure  S


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B
GGG

TTT


GGGTS

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B
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   84.....90. ........100.........110.........120.........130.........140.........150.........160
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFV
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Template Sequence  ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYV
Template Known Secondary structure  TTT

BSSGGGTST
TT
S
B
SGGGTT
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   240.........250..
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Query Sequence  NGHLLFVDGGMLV
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Template Sequence  TGAILAVDGGYTV
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STTGGG
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   241........250...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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