Job Description P0A9P9 Confidence 99.96% Date Thu Jan 5 11:10:57 GMT 2012 Rank 179 Aligned Residues 223 % Identity 20% Template c2qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1 Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	G	K	N	I	L	I	T	G	S	A	Q	G	I	G	F	L	L	A	T	G	L	G	K	Y	G	A	Q	I	I	I	N	D	I	T	A	E	R	A	E	L	A	V	E	K	L	H	Q	E	G	I	Q	A	V	A	A	P	F	N	V	T	H	K	H	E	I	D	A	A	V	E	H	I	E	K	D	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	N	G	Q	V	C	V	V	T	G	A	S	R	G	I	G	R	G	I	A	L	Q	L	C	K	A	G	A	T	V	Y	I	T	G	R	H	L	D	T	L	R	V	V	A	Q	E	A	Q	S	L	G	G	Q	C	V	P	V	V	C	D	S	S	Q	E	S	E	V	R	S	L	F	E	Q	V	D	R	E	Q	Q
Template Known Secondary structure		T	T	T	T						S	S	T	T	S													T	T								S																S	S									T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		P	I	D	V	L	V	N	N	.	.	.	.	.	.	.	A	G	I	Q	R	R	H	P	F	T	E	F	P	E	Q	E	W	N	D	V	I	A	V	N	Q	T	A	V	F	L	V	S	Q	A	V	T	R	H	M	V	E	R	K	A	G	K	V	I	N	I	C	S	M	Q	S	E	L	G	R	D	T	I	T	P	Y
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	L	D	V	L	V	N	N	A	Y	A	G	V	Q	T	I	L	N	T	R	N	K	A	F	W	E	T	P	A	S	M	W	D	D	I	N	N	V	G	L	R	G	H	Y	F	C	S	V	Y	G	A	R	L	M	V	P	A	G	Q	G	L	I	V	V	I	S	S	P	G	S	L	Q	Y	M	F	N	V	P	Y
Template Known Secondary structure		T											T	T							T	T	T			T	T	T	S		T	T							T	T	T	T															G	G	G	T										G	G	G	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		A	A	S	K	G	A	V	K	M	L	T	R	G	M	C	V	E	L	A	R	H	N	I	Q	V	N	G	I	A	P	G	Y	F	K	T	E	M	T	K	A	L	V	E	D	E	A	F	T	A	W	L	C	K	R	T	P	A	A	R	W	G	D	P	Q	E	L	I	G	A	A	V	F	L	S	S	.	K	A	S	D
Query Conservation																																																																													.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	K	A	A	C	D	K	L	A	A	D	C	A	H	E	L	R	R	H	G	V	S	C	V	S	L	W	P	G	I	V	Q	T	E	L	L	S	S	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	E	L	S	G	K	C	V	V	A	L	A	T	D	P	N	I	L
Template Known Secondary structure																				G	G	G	T											S		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T		T	T	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		238	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	N	G	H	L	L	F	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	S	G	K	V	L	P	S	C
Template Known Secondary structure		G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions