Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9P9
Confidence100.00%DateThu Jan 5 11:10:57 GMT 2012
Rank15Aligned Residues247
% Identity26%Templatec2b4qB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:rhamnolipids biosynthesis 3-oxoacyl-[acyl- PDBTitle: pseudomonas aeruginosa rhlg/nadp active-site complex
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHI
Query Conservation 
     
 

 






 


 
 
  

  

 

   
                        
              
Alig confidence 















































































Template Conservation 
     
 

 






 


 
 
  

  

 

   
                                       
Template Sequence  MHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALG
Template Known Secondary structure 

TTT

TT
TTTST

S
TTTS





SS
Template Predicted Secondary structure 

































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150...... ...
Predicted Secondary structure 
























































.
Query SS confidence 











































































.


Query Sequence  EKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTIT. PYA
Query Conservation                                                                  
           . 
 
Alig confidence 













.....
























































.


Template Conservation                .....                                             
               
Template Sequence  ELSARLDILVNNAG. . . . . TSPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYG
Template Known Secondary structure  TT
S

S


.....


GGGT

SSS


GGGT
S


S
TT
Template Predicted Secondary structure 










.....











































Template SS confidence 















































































   81........90.... .....100.........110.........120.........130.........140.........150.....
 
   160.........170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFV
Query Conservation   

          
 
     



 
 

 
 
                    
  
   
 


  
 

 
  
  
Alig confidence 















































































Template Conservation   

          
 
     
 
  
 

   
                    
  
   
 


 

 

 
  
  
Template Sequence  PSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYM
Template Known Secondary structure  GGGT
S


GGG
TTSTTSS


SGGGTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   240.........250..
Predicted Secondary structure 





Query SS confidence 












Query Sequence  NGHLLFVDGGMLV
Query Conservation 

  
 



   
Alig confidence 












Template Conservation 

  
 



   
Template Sequence  TGNVIPIDGGFHL
Template Known Secondary structure 
S
STTTT
Template Predicted Secondary structure 








Template SS confidence 












   244.....250......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions