Job Description P76010 Confidence 4.93% Date Thu Jan 5 12:17:19 GMT 2012 Rank 40 Aligned Residues 40 % Identity 18% Template c3hsbB_ PDB info PDB header:rna binding protein/rna Chain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	V	L	R	D	L	H	K	A	A	I	P	L	R	L	S	W	.	N	G	G	Q	L	I	S	K	L	L	A	I	T	P	D	K	L	V	L	D	F	G	S
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		Q	F	L	N	Q	I	R	K	E	N	T	Y	V	T	V	F	L	L	N	G	F	Q	L	R	G	Q	V	K	G	F	D	N	F	T	V	L	L	E	S	E	G
Template Known Secondary structure										T	T								T	T	S												S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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