Job Description P76010 Confidence 100.00% Date Thu Jan 5 12:17:19 GMT 2012 Rank 1 Aligned Residues 225 % Identity 21% Template c2gjgA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:hypothetical protein pp4397; PDBTitle: crystal structure of a pilz-containing protein (pp4397) from2 pseudomonas putida kt2440 at 2.25 a resolution Resolution 2.25 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																.	.														.	.
Query SS confidence																																.	.														.	.
Query Sequence		F	L	K	Q	N	P	L	A	V	L	G	V	L	R	D	L	H	K	A	A	I	P	L	R	L	S	W	N	G	G	.	.	Q	L	I	S	K	L	L	A	I	T	P	D	K	.	.	L	V	L	D	F	G	S	Q	A	E	D	N	I	A	V	L	K	A	Q	H	I	T	I	T	A	E	T	Q	G	A	K	V	E
Query Conservation																																.	.														.	.
Alig confidence																																.	.														.	.
Template Conservation
Template Sequence		K	V	L	S	T	P	L	E	I	A	A	N	L	R	Q	L	Q	E	S	H	D	P	L	I	I	T	F	H	D	R	S	H	R	F	Q	S	Y	V	V	H	V	D	R	E	S	N	T	L	A	L	D	E	X	I	P	R	D	G	E	K	F	I	E	N	G	E	H	F	R	V	E	G	F	H	D	G	V	R	I	A
Template Known Secondary structure						S														T	T								T	T		S	S											T	T	T	T								B	S	G	G	G						T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		84	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																												.	.	.
Query SS confidence										.																																												.	.	.
Query Sequence		F	T	V	E	Q	L	Q	Q	.	S	E	Y	L	Q	L	P	A	F	I	T	V	P	P	P	T	L	W	F	V	Q	R	R	R	Y	F	R	I	S	A	P	L	H	P	P	Y	F	C	Q	T	K	L	A	.	.	.	D	N	S	T	L	R	F	R	L	Y	D	L	S	L	G	G	M	G	A	L	L	E	T	A	K
Query Conservation										.																																												.	.	.
Alig confidence										.																																												.	.	.
Template Conservation
Template Sequence		W	E	C	D	H	A	L	K	I	S	E	V	D	G	H	R	C	Y	S	G	P	L	P	Q	E	V	T	Y	H	Q	R	R	N	A	F	R	A	A	L	K	L	S	Q	L	V	D	I	I	L	D	G	A	H	L	K	G	N	G	A	X	R	G	K	L	L	D	I	S	A	T	G	C	K	L	R	F	E	G	N	V
Template Known Secondary structure						S								T	T										S															T	T	S	S	S									T	T			S	S	S											S	S								S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	E	L	Q	E	G	M	R	F	A	Q	I	E	V	N	M	G	Q	W	G	V	F	H	F	D	A	Q	L	I	S	I	S	E	R	K	V	I	D	G	K	N	E	T	I	T	T	P	R	L	S	F	R	F	L	N	V	S	P	T	V	E	R	Q	L	Q	R	I	I	F	S	L	E	R	E	A	R	E	K	A
Query Conservation
Alig confidence																					.															.	.	.	.	.	.	.
Template Conservation																					.															.	.	.	.	.	.	.
Template Sequence		E	D	R	L	Q	L	G	Q	V	Y	E	R	F	K	A	G	N	P	L	.	G	L	V	D	T	X	V	E	L	R	H	L	H	Y	.	.	.	.	.	.	.	E	E	R	I	N	T	T	F	A	G	V	R	F	H	N	L	S	G	Q	A	Q	R	K	I	E	S	F	V	Y	Q	L	Q	R	E	A	R	R	F	D
Template Known Secondary structure		G	G	G			T	T										T	T	T	.															.	.	.	.	.	.	.		G	G	G	T										S
Template Predicted Secondary structure																					.															.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.								.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		240
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		244

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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