Job Description P31126 Confidence 100.00% Date Thu Jan 5 11:47:11 GMT 2012 Rank 2 Aligned Residues 390 % Identity 11% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		M	N	L	S	L	R	R	S	T	S	A	L	L	A	S	S	L	L	L	T	I	G	R	G	A	T	.	.	.	L	P	F	M	T	I	Y	L	S	R	Q	Y	S	L	S	V	D	L	I	G	Y	A	M	T	I	A	L	T	I	G	V	V	F	S	L	G	F	G	I	L	A	D	K	F	D	K	K	R	Y	M	L
Query Conservation																												.	.	.
Alig confidence																												.	.	.									.
Template Conservation																																							.
Template Sequence		I	D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	.	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F	L	P
Template Known Secondary structure																													T	S								T	.	T	S	S	T	T		S	S																											S
Template Predicted Secondary structure																																							.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		L	A	I	T	A	F	A	S	G	F	I	A	I	.	.	.	.	T	L	V	N	N	V	T	L	V	V	L	F	F	A	L	I	N	C	A	Y	S	V	F	A	T	V	L	K	A	W	F	A	D	N	L	S	S	T	S	K	T	K	I	F	S	I	N	Y	T	M	L	N	I	G	W	T	I	G	P	P	L	G	T
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L
Template Known Secondary structure																						S	S	S	S																T										T	T		T	T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		154	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure							.	.																																															.	.	.	.	.	.
Query SS confidence							.	.																																															.	.	.	.	.	.
Query Sequence		L	L	V	M	Q	.	.	S	I	N	L	P	F	W	L	A	A	I	C	S	A	F	P	M	L	F	I	Q	I	W	V	K	R	S	E	K	I	I	A	T	E	T	G	S	V	W	S	P	K	V	L	L	Q	.	.	.	.	.	.	D	K	A	L	L	W	F	T	C	S	G	F	L	A	S	F	V	S	G	A	F
Query Conservation							.	.																																															.	.	.	.	.	.
Alig confidence							.	.																																															.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y
Template Known Secondary structure							T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		A	S	C	I	S	Q	Y	V	M	V	I	A	D	G	D	F	A	E	K	V	V	A	V	V	L	P	V	N	A	A	M	V	V	T	L	Q	Y	S	V	G	R	R	L	N	P	A	N	I	R	A	L	M	T	A	G	T	L	C	F	V	I	G	L	V	G	F	I	F	S	.	.	.	.	G	N	S	L	L	L	W
Query Conservation																																																																							.	.	.	.
Alig confidence																																																																							.	.	.	.
Template Conservation
Template Sequence		G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D
Template Known Secondary structure											B	T	T	B	S																																T	S	T	T																				T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		G	M	S	A	A	V	F	T	V	G	E	I	I	Y	A	P	G	E	Y	M	L	I	D	H	I	A	P	P	E	M	K	A	S	Y	F	S	A	Q	S	L	G	W	.	.	L	G	A	A	I	N	P	L	V	S	G	V	V	L	T	S	L	P	P	S	S	L	F	V	I	L	A	L	V	I	I	A	A	W	V	L
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L
Template Known Secondary structure													T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	K	G	I	R	A	R	P	W	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	V	V	M	I	G	E	K	R	R	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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