Job Description Q46811 Confidence 99.68% Date Wed Jan 25 15:21:12 GMT 2012 Rank 115 Aligned Residues 317 % Identity 21% Template d1tv5a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		F	E	E	L	L	T	R	I	F	D	E	Y	Q	Q	Q	R	S	I	.	.	.	.	F	G	I	P	E	Q	Q	F	Y	S	P	V	K	G	K	T	V	S	V	F	G	E	T	C	A	T	P	V	G	P	A	A	G	P	H	T	Q	L	A	Q	N	I	V	T	S	W	L	T	G	G	R	F	I	E	L	K	T	V
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																																									.
Template Conservation																																																																.
Template Sequence		L	K	F	C	L	K	Y	I	D	G	E	I	C	H	D	L	F	L	L	L	G	K	Y	N	I	L	P	Y	D	T	S	N	D	S	I	Y	A	C	T	N	I	K	H	L	D	F	I	N	P	F	G	V	A	A	G	F	D	K	N	G	V	C	.	I	D	S	I	L	K	L	G	F	S	F	I	E	I	G	T	I
Template Known Secondary structure									S															T	T		S					S				G	G	G					T	T				S	S	S					T	T	T	T	T	T		S	S	.						T	T	T		S
Template Predicted Secondary structure																																																																.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		86	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure															.	.								.
Query SS confidence															.	.								.
Query Sequence		Q	I	L	D	R	L	E	L	E	K	P	C	I	.	.	D	A	E	D	E	C	F	.	N	T	E	W	S	T	E	F	T	L	L	K	A	W	D	E	Y	L	K	A	W	F	A	L	H	L	L	E	A	M	F	Q	P	S	D	S	G	K	S	F	I	F	N	M	S	V	G	Y	N	L	E	G	I	K	Q	P	P
Query Conservation															.	.								.
Alig confidence															.	.								.																											.	.	.	.	.	.	.																				.	.
Template Conservation																																																			.	.	.	.	.	.	.																				.	.
Template Sequence		T	P	R	G	Q	T	G	N	A	K	P	R	I	F	R	D	V	E	S	R	S	I	I	N	S	C	G	F	N	N	M	G	C	D	K	V	T	E	N	L	I	L	F	R	K	R	Q	E	E	.	.	.	.	.	.	.	D	K	L	L	S	K	H	I	V	G	V	S	I	G	K	N	K	D	T	.	.	V	N	I
Template Known Secondary structure			S	S		B			S		S							T	T	T	T								S		B	S																			.	.	.	.	.	.	.		S	T	T	T	T											T	T		.	.	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.																				.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.								300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	Q	F	I	D	N	M	M	D	A	S	D	H	P	K	F	A	Q	Y	R	D	T	L	N	K	L	L	Q	D	D	A	F	L	A	R	H	G	L	Q	E	K	R	E	S	L	Q	A	L	P	A	R	I	P	T	S	M	V	H	G	V	T	L	S	T	M	H	G	C	P	P	H	E	I	E	A	I	C	R	Y
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S
Template Known Secondary structure													G	G	G		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	T	T	G	G	G	G	G	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.																																				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		243	.	.	.	.														.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	E	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	N	T	F	V	K	L	N	P	T	L	L	G	Y	A	R	V	R	E	I	L	D	V	C	G	F	G	Y	I	G	L	K	E	E	S	F	D	H	D	L	K	L	T	Q	A	L	E	M	L	E	R	L	M	A	L	A	K	E	K	S	L
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	.	.	.
Template Known Secondary structure															S	S	S	S	S										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T		S	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.																														.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	F	G	V	K	L	T	N	T	L	G	T	I	N	N	K	G	A	L	P	G	E	E	M	Y	M	S	G	R	A	L	F	P	L	S	I	N	V	A	A	V	L	S	R	A	F	D	G	K	L	P	I	S	Y	S	G	G	.	A	S	Q	L	T	I	R	D	I	F	D	T	G	I	R	P	I	T	M	A	T	D
Query Conservation																																																											.
Alig confidence		.	.																																																								.
Template Conservation		.	.
Template Sequence		.	.	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C
Template Known Secondary structure		.	.								B	S						G	G	G	T	T			S																						T	T	T		S						S	S			S										T	T							S
Template Predicted Secondary structure		.	.
Template SS confidence
				453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	K	P	G	G	Y	L	R	L	S	A	C	M	R	E	L	E
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		L	V	F	.	N	G	M	K	S	A	V	Q	I	K	R	E	L	N
Template Known Secondary structure					.		G	G	G
Template Predicted Secondary structure					.
Template SS confidence
		531	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions