 |
Job Description | Q46811 | Confidence | 98.90% | Date | Wed Jan 25 15:21:12 GMT 2012 |
Rank | 221 | Aligned Residues | 123 |
% Identity | 16% | Template | d1trba2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 2.00 |
|
 |
  |   |
650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | |
|
. | . | . | . | . | . | 720 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | L | A | G | D | N | Q | N | V | W | K | S | L | P | F | L | R | E | Y | N | K | G | T | A | L | K | L | G | K | H | V | V | V | V | G | A | G | N | T | A | M | D | C | A | R | A | A | L | R | V | P | G | V | E | K | A | T | I | V | Y | R | R | S | . |
. |
L | Q | E | M | P | A | W | R | E | E | Y | E | E | A |
Query Conservation |   |
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|   | . | . |   |   |   |
|
|
|   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |
|
|   |   |   | . | . |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   | . | . |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | G | L | P | S | E | E | A | F | K | G | R | G | V | S | A | C | A | T | S | . |
. |
D | G | F | F | Y | R | N | Q | K | V | A | V | I | G | G | G | N | T | A | V | E | E | A | L | Y | L | S | N | I | . |
. |
A | S | E | V | H | L | I | H | R | R | D | G | F | R | A | E | K | I | L | I | K | R | L | M | D | K | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  | T | B | T | T | T |  |  | S |
|  |  |  | . | . |  | G | G | G | G | T | T | S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | S | S |  |  |  |  |  |
| S | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |
  |   |
728 | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | |
. | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | H | D | G | V | E | F | R | F | L | N | N | P | E | R | F | D | A | . |
D | G | T | L | T | L | R | V | M | S | L | G | E | P | D | E | K | G | R | R | R | P | V | E | T | N | E | T | V | T | L | L | V | D | S | L | I | T | A | I | G |
Query Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|   |   | . |   |
|   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |
|
Template Sequence |   |
E | N | G | N | I | I | L | H | T | N | R | T | L | E | E | V | T | G | D | Q | M | G | V | T | G | V | R | L | R | D | T | Q | N | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | N | I | E | S | L | D | V | A | G | L | F | V | A | I | G |
Template Known Secondary structure |   |
 | T | S | S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |
|
| T | T |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
| S |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|