 |
Job Description | Q46811 | Confidence | 98.91% | Date | Wed Jan 25 15:21:12 GMT 2012 |
Rank | 215 | Aligned Residues | 89 |
% Identity | 22% | Template | d1nhpa2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 2.00 |
|
 |
  |   |
546 | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | |
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
G | S | G | S | R | H | P | V | A | V | I | G | A | G | P | A | G | L | A | A | G | Y | F | L | A | R | A | G | H | P | V | T | L | F | E | R | E | A | N | A | G | G | V | V | K | N | I | I | P | Q | F | R | I | P | A | E | L | I | Q | H | D | I | D | F | V | A | A | H | G | V | K | F | E | Y | G | C | S | P | . |
. |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
V | D | P | E | V | N | N | V | V | V | I | G | S | G | Y | I | G | I | E | A | A | E | A | F | A | K | A | G | K | K | V | T | V | I | D | I | L | D | R | P | L | G | V | . |
. |
. |
. |
. |
. |
. |
. |
Y | L | D | K | E | F | T | D | V | L | T | E | E | M | E | A | N | N | I | T | I | A | T | G | E | T | V | E | R |
Template Known Secondary structure |   |
T |
| T | T |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S | S | T | T | T | T | . | . | . | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
624 | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
D | L | T | I | E | Q | L | K | N | Q | G | F | H | Y | V | L | I | A | T |
Query Conservation |   |
. | . | . | . | . | . | . |
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|
|
Template Sequence |   |
Y | E | G | D | G | R | V | Q | K | V | V | T | D | K | N | A | Y | D | A | D | L | V | V | V | A | V |
Template Known Secondary structure |   |
 |  |
| S | S | B |
|
|  |  |  |  | S | S |
|  |  |  |
| S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|